Malik R, et al. (2024) Cryo-EM structure of the Rev1-Polzeta holocomplex reveals the mechanism of their cooperativity in translesion DNA synthesis. Nat Struct Mol Biol.
PMID: 38720088
Aithal R, et al. (2024) Physical interaction with Spo11 mediates the localisation of Mre11 to chromatin in meiosis and promotes its nuclease activity. Nucleic Acids Res 52(8): 4328-4343.
PMID: 38407383
Kim E, et al. (2024) Whole-cell bioconversion for producing thymoquinone by engineered Saccharomyces cerevisiae. Enzyme Microb Technol 178: 110455.
PMID: 38723387
Wang WY, et al. (2024) Key role of K(+) and Ca(2+) in high-yield ethanol production by S. Cerevisiae from concentrated sugarcane molasses. Microb Cell Fact 23(1): 123.
PMID: 38724968
Zhang C, et al. (2024) De novo production of bioactive sesterterpenoid ophiobolins in Saccharomyces cerevisiae cell factories. Microb Cell Fact 23(1): 129.
PMID: 38711040
Ganser SJ, et al. (2024) Unique characteristics of the J-domain proximal regions of Hsp70 cochaperone Apj1 in prion propagation/elimination and its overlap with Sis1 function. Front Mol Biosci 11: 1392608.
PMID: 38721277
Kalra S, et al. (2024) Overexpression of PDR16 Confers Amphotericin B Resistance in a PMP3-Dependent Manner in Yeast Saccharomyces cerevisiae. Microb Drug Resist.
PMID: 38727600
Blank HM, et al. (2024) Translational control of MPS1 links protein synthesis with the initiation of cell division and spindle pole body duplication in Saccharomyces cerevisiae. Genetics.
PMID: 38713088
Kung HC, et al. (2024) Biosynthetic Pathways of Tryptophan Metabolites in Saccharomyces cerevisiae Strain: Insights and Implications. Int J Mol Sci 25(9).
PMID: 38731967
Jacobus AP, et al. (2024) Optimal trade-off between boosted tolerance and growth fitness during adaptive evolution of yeast to ethanol shocks. Biotechnol Biofuels Bioprod 17(1): 63.
PMID: 38730312
Herlah B, et al. (2024) Molecular choreography: Unveiling the dynamic landscape of type IIA DNA topoisomerases before T-segment passage through all-atom simulations. Int J Biol Macromol 131991.
PMID: 38714283
Talavera RA, et al. (2024) Cell growth and nutrient availability control the mitotic exit signaling network in budding yeast. J Cell Biol 223(8).
PMID: 38722822
Chakarborty S, et al. (2024) TIR predictor and optimizer: Web-tools for accurate prediction of translation initiation rate and precision gene design in Saccharomyces cerevisiae. Biotechnol J 19(5): e2400081.
PMID: 38719586
Okafor O and Kim K (2024) Cytotoxicity of Quantum Dots in Receptor-Mediated Endocytic and Pinocytic Pathways in Yeast. Int J Mol Sci 25(9).
PMID: 38731933
Hengardi MT, et al. (2024) Reversing the directionality of reactions between non-oxidative pentose phosphate pathway and glycolytic pathway boosts mycosporine-like amino acid production in Saccharomyces cerevisiae. Microb Cell Fact 23(1): 121.
PMID: 38725068
Schmidt L, et al. (2024) Delineating organizational principles of the endogenous L-A virus by cryo-EM and computational analysis of native cell extracts. Commun Biol 7(1): 557.
PMID: 38730276
Murdoch E, et al. (2024) Hypothesis: evidence that the PRS gene products of Saccharomyces cerevisiae support both PRPP synthesis and maintenance of cell wall integrity. Curr Genet 70(1): 6.
PMID: 38733432
Chen PK, et al. (2024) Dysfunction of Avo3, an essential component of target of rapamycin complex 2, induces ubiquitin-proteasome-dependent downregulation of Avo2 in Saccharomyces cerevisiae. Biochem Biophys Res Commun 717: 150045.
PMID: 38718572
Horvath A, et al. (2024) Comprehensive translational profiling and STE AI uncover rapid control of protein biosynthesis during cell stress. Nucleic Acids Res.
PMID: 38721779
Schnepper AP, et al. (2024) Potential global cis and trans regulation of lncRNAs in Saccharomyces cerevisiae subjected to ethanol stress. Gene 920: 148521.
PMID: 38703868
Bubphasawan S, et al. (2024) Efficient beta-carotene production in engineered Saccharomyces cerevisiae using simple sugars and agricultural waste-based carbon and nitrogen sources. Bioresour Technol 130799.
PMID: 38710418
Chabert V, et al. (2023) Inositol pyrophosphate dynamics reveals control of the yeast phosphate starvation program through 1,5-IP(8) and the SPX domain of Pho81. Elife (Cambridge) 12.
PMID: 37728314
Ali SA, et al. (2024) New regulatory role of Znf1 in transcriptional control of pentose phosphate pathway and ATP synthesis for enhanced isobutanol and acid tolerance. Yeast.
PMID: 38708451
Maloney AE, et al. (2024) Large enrichments in fatty acid (2)H/(1)H ratios distinguish respiration from aerobic fermentation in yeast Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 121(20): e2310771121.
PMID: 38709917
Logan CJ, et al. (2024) Thermotolerance in S. cerevisiae as a model to study extracellular vesicle biology. J Extracell Vesicles 13(5): e12431.
PMID: 38711329
Belkevich AE, et al. (2024) Minimization and complete loss of general transcription factor proteins in the intracellular parasite Encephalitozoon cuniculi. Transcription 1-17.
PMID: 38722258
Liu M, et al. (2024) Three-dimensional architecture of ESCRT-III flat spirals on the membrane. Proc Natl Acad Sci U S A 121(20): e2319115121.
PMID: 38709931
Kwon YY, et al. (2024) The ICL1 and MLS1 Genes, Integral to the Glyoxylate Cycle, are Essential and Specific for Caloric Restriction-Mediated Extension of Lifespan in Budding Yeast. Adv Biol (Weinh) e2400083.
PMID: 38717792
Cotoras D (2024) Enhancing complex bioprocess learning through simulation technology and hybrid teaching: A case study in university education. Biochem Mol Biol Educ.
PMID: 38706439
Leal-Alves C, et al. (2024) Integrating microfluidics and synthetic biology: advancements and diverse applications across organisms. Lab Chip.
PMID: 38712893
Lu AX and Moses AM (2024) Using Dimensionality Reduction to Visualize Phenotypic Changes in High-Throughput Microscopy. Methods Mol Biol 2800: 217-229.
PMID: 38709487
Harmer ZP, et al. (2024) Dynamic Multiplexed Control and Modeling of Optogenetic Systems Using the High-Throughput Optogenetic Platform, Lustro. ACS Synth Biol.
PMID: 38684225
Li Y, et al. (2024) Improving aromatic higher alcohol acetates in wines by co-fermentation of P. kluyveri and S. cerevisiae: growth interaction and amino acid competition. J Sci Food Agric.
PMID: 38690688
Sugawara N, et al. (2024) Spontaneous and double-strand break repair-associated quasipalindrome and frameshift mutagenesis in budding yeast: role of mismatch repair. Genetics.
PMID: 38691577
Sica J, et al. (2024) Strain prevalence and killer factor only partially influence the fermentation activity of pairwise Saccharomyces cerevisiae wine strains inoculation. PLoS One 19(4): e0300212.
PMID: 38683869
Chalivendra S, et al. (2024) Selected humanization of yeast U1 snRNP leads to global suppression of pre-mRNA splicing and mitochondrial dysfunction in the budding yeast. RNA.
PMID: 38688558
Teyssonniere EM, et al. (2024) Species-wide quantitative transcriptomes and proteomes reveal distinct genetic control of gene expression variation in yeast. Proc Natl Acad Sci U S A 121(19): e2319211121.
PMID: 38696467
Senger MR, et al. (2024) Kinetics and molecular modeling studies on the inhibition mechanism of GH13 alpha-glycosidases by small molecule ligands. Int J Biol Macromol 132036.
PMID: 38697429
Moller-Hansen I, et al. (2024) Deorphanizing solute carriers in Saccharomyces cerevisiae for secondary uptake of xenobiotic compounds. Front Microbiol 15: 1376653.
PMID: 38680917
Schneider S, et al. (2024) Complementary structures of the yeast phosphate transporter Pho90 provide insights into its transport mechanism. Structure.
PMID: 38688287
Schlarmann P, et al. (2024) Ceramide sorting into non-vesicular transport is independent of acyl chain length in budding yeast. Biochem Biophys Res Commun 715: 149980.
PMID: 38678780
Zolotukhina EV, et al. (2024) Towards controlled and simple design of non-enzymatic amperometric sensor for glycerol determination in yeast fermentation medium. Anal Bioanal Chem.
PMID: 38702446
Muller DH, et al. (2024) Bioprocess in-line monitoring and control using Raman spectroscopy and Indirect Hard Modeling (IHM). Biotechnol Bioeng.
PMID: 38678541
Pietras PJ, et al. (2024) Dynamic protein composition of Saccharomyces cerevisiae ribosomes in response to multiple stress conditions reflects alterations in translation activity. Int J Biol Macromol 268(Pt 2): 132004.
PMID: 38697435
Maslanka R, et al. (2024) Virtually identical does not mean exactly identical: Discrepancy in energy metabolism between glucose and fructose fermentation influences the reproductive potential of yeast cells. Arch Biochem Biophys 756: 110021.
PMID: 38697344
Brettrager EJ, et al. (2024) Zymolyase Treatment of Saccharomyces cerevisiae Affects Cellular Proteins and Degrades Tyrosyl-DNA Phosphodiesterase I. DNA Cell Biol.
PMID: 38682313
Martinusen SG, et al. (2024) Modular and integrative activity reporters enhance biochemical studies in the yeast ER. Protein Eng Des Sel.
PMID: 38696722
Xu XH and Liu YD (2024) [Research Progress in the Roles of MRE11-RAD50-NBS1 Complex and Human Diseases]. Zhongguo Yi Xue Ke Xue Yuan Xue Bao 46(2): 232-241.
PMID: 38686720
Dai M, et al. (2024) The EH domain-containing protein, EdeA, is involved in endocytosis, cell wall integrity, and pathogenicity in Aspergillus fumigatus. mSphere e0005724.
PMID: 38687129
Xia A, et al. (2024) The ING protein Fng2 associated with RPD3 HDAC complex for the regulation of fungal development and pathogenesis in wheat head blight fungus. Int J Biol Macromol 268(Pt 2): 131938.
PMID: 38692539
Utkur K, et al. (2024) Functional Integrity of Radical SAM Enzyme Dph1*Dph2 Requires Non-Canonical Cofactor Motifs with Tandem Cysteines. Biomolecules 14(4).
PMID: 38672486
Abbasi AF, et al. (2024) Long extrachromosomal circular DNA identification by fusing sequence-derived features of physicochemical properties and nucleotide distribution patterns. Sci Rep 14(1): 9466.
PMID: 38658614
Tong Y, et al. (2024) Improvement of Chalcone Synthase Activity and High-Efficiency Fermentative Production of (2S)-Naringenin via In Vivo Biosensor-Guided Directed Evolution. ACS Synth Biol.
PMID: 38662928
Zhang N, et al. (2024) Self-controlled in silico gene knockdown strategies to enhance the sustainable production of heterologous terpenoid by Saccharomyces cerevisiae. Metab Eng 83: 172-182.
PMID: 38648878
Xu S, et al. (2023) Exploiting a heterologous construction of the 3-hydroxypropionic acid carbon fixation pathway with mesaconate as an indicator in Saccharomyces cerevisiae. Bioresour Bioprocess 10(1): 33.
PMID: 38647598
Varela Salgado M, et al. (2024) Phosphorylation of the F-BAR protein Hof1 drives septin ring splitting in budding yeast. Nat Commun 15(1): 3383.
PMID: 38649354
Tod NP, et al. (2024) The role of histone H3 leucine 126 in fine-tuning the copper reductase activity of nucleosomes. J Biol Chem 107314.
PMID: 38657861
Magliozzi JO, et al. (2024) The roles of yeast formins and their regulators Bud6 and Bil2 in the pheromone response. Mol Biol Cell mbcE23110459.
PMID: 38656798
Pan L, et al. (2024) A protein network refinement method based on module discovery and biological information. BMC Bioinformatics 25(1): 157.
PMID: 38643108
Sampathkumar A, et al. (2024) Replication protein-A, RPA, plays a pivotal role in the maintenance of recombination checkpoint in yeast meiosis. Sci Rep 14(1): 9550.
PMID: 38664461
Martins TS, et al. (2024) Sit4 Genetically Interacts with Vps27 to Regulate Mitochondrial Function and Lifespan in Saccharomyces cerevisiae. Cells 13(8).
PMID: 38667270
Schindler D, et al. (2024) Methodological advances enabled by the construction of a synthetic yeast genome. Cell Rep Methods 4(4): 100761.
PMID: 38653205
Pannafino G, et al. (2024) The Dmc1 recombinase physically interacts with and promotes the meiotic crossover functions of the Mlh1-Mlh3 endonuclease. Genetics.
PMID: 38657110
Chen F, et al. (2024) Precision isolation and cultivation of single cells by vortex and flat-top laser ejection. Front Microbiol 15: 1369506.
PMID: 38659989
Antunes M and Sa-Correia I (2024) The role of ion homeostasis in adaptation and tolerance to acetic acid stress in yeasts. FEMS Yeast Res.
PMID: 38658183
Zbieralski K, et al. (2024) Multilevel Regulation of Membrane Proteins in Response to Metal and Metalloid Stress: A Lesson from Yeast. Int J Mol Sci 25(8).
PMID: 38674035
Jun SE, et al. (2024) Evolutionary Conservation in Protein-Protein Interactions and Structures of the Elongator Sub-Complex ELP456 from Arabidopsis and Yeast. Int J Mol Sci 25(8).
PMID: 38673955
Rivetta A and Slayman C (2024) Electrophysiology of fluoride channels in the yeasts Saccharomyces cerevisiae and Candida albicans. Methods Enzymol 696: 3-24.
PMID: 38658085
Sokolov SS, et al. (2024) The Imidazolium Ionic Liquids Toxicity is Due to Their Effect on the Plasma Membrane. Biochemistry (Mosc) 89(3): 451-461.
PMID: 38648765
Miller M, et al. (2024) CURE on yeast genes of unknown function increases students' bioinformatics proficiency and research confidence. J Microbiol Biol Educ 25(1): e0016523.
PMID: 38661403
Osborne M, et al. (2024) WHO elements - A new category of selfish genetic elements at the borderline between homing elements and transposable elements. Semin Cell Dev Biol.
PMID: 38664119
Shan C, et al. (2023) The impacts of nicotinamide and inositol on the available cells and product performance of industrial baker's yeasts. Bioresour Bioprocess 10(1): 41.
PMID: 38647809
Musharaf Hossain M, et al. (2024) The Plasmodiophora brassicae Golgi-localized UPF0016 protein PbGDT1 mediates calcium but not manganese transport in yeast and Nicotiana benthamiana. Fungal Genet Biol 103896.
PMID: 38663635
Ma T, et al. (2024) S-acylation of YKT61 modulates its unconventional participation in the formation of SNARE complexes in Arabidopsis. J Genet Genomics.
PMID: 38642801
Zhang Q and Cao H (2024) Expression of chitosanase from Aspergillus fumigatus chitosanase in Saccharomyces cerevisiae by CRISPR-Cas9 tools. Bioresour Bioprocess 11(1): 20.
PMID: 38647990
Yim C, et al. (2024) Abundance of the Membrane Proteome in Yeast Cells Lacking Spc1, a Non-catalytic Subunit of the Signal Peptidase Complex. J Membr Biol.
PMID: 38630294
Kayalvizhi R, et al. (2024) An Eclectic Review on Dicarboxylic Acid Production Through Yeast Cell Factories and Its Industrial Prominence. Curr Microbiol 81(6): 147.
PMID: 38642080
Muyanli EB and Yilmaz R (2024) RT-qPCR based quantitative analysis of ARO and ADH genes in Saccharomyces cerevisiae and Metschnikowia pulcherrima strains growth white grape juice. Mol Biol Rep 51(1): 547.
PMID: 38642187
Cruz VE, et al. (2024) The DEAD-box ATPase Dbp10/DDX54 initiates peptidyl transferase center formation during 60S ribosome biogenesis. Nat Commun 15(1): 3296.
PMID: 38632236
Bernard A, et al. (2024) Efficient production of (S)-limonene and geraniol in Saccharomyces cerevisiae through the utilization of an Erg20 mutant with enhanced GPP accumulation capability. Metab Eng.
PMID: 38631459
Dennis AF, et al. (2024) Examining chromatin heterogeneity through PacBio long-read sequencing of M.EcoGII methylated genomes: an m6A detection efficiency and calling bias correcting pipeline. Nucleic Acids Res.
PMID: 38634798
Gotz MG, et al. (2024) Macrocyclic Oxindole Peptide Epoxyketones-A Comparative Study of Macrocyclic Inhibitors of the 20S Proteasome. ACS Med Chem Lett 15(4): 533-539.
PMID: 38628795
Gaussmann S, et al. (2024) Modulation of peroxisomal import by the PEX13 SH3 domain and a proximal FxxxF binding motif. Nat Commun 15(1): 3317.
PMID: 38632234
Nieto-Panqueva F, et al. (2024) Identification of factors limiting the allotopic production of the Cox2 subunit of yeast cytochrome c oxidase. Genetics.
PMID: 38626319
Henke-Schulz L, et al. (2024) The Prp19C subunit Syf2 and the Prp19C-associated protein Cwc15 function in TREX occupancy and transcription elongation. RNA.
PMID: 38627018
Awad S, et al. (2024) A data-driven estimation of the ribosome drop-off rate in S. cerevisiae reveals a correlation with the genes length. NAR Genom Bioinform 6(2): lqae036.
PMID: 38638702
Limcharoensuk T, et al. (2024) Protein quality control systems in the endoplasmic reticulum and the cytosol coordinately prevent alachlor-induced proteotoxic stress in Saccharomyces cerevisiae. J Hazard Mater 471: 134270.
PMID: 38640676
Higdon AL, et al. (2024) Truncated protein isoforms generate diversity of protein localization and function in yeast. Cell Syst 15(4): 388-408.e4.
PMID: 38636458
Nezhad NG, et al. (2024) Functional expression, purification, biochemical and biophysical characterizations, and molecular dynamics simulation of a histidine acid phosphatase from Saccharomyces cerevisiae. World J Microbiol Biotechnol 40(6): 171.
PMID: 38630327
Nishikawa A, et al. (2024) Ngk1 kinase-mediated N-acetylglucosamine metabolism promotes UDP-GlcNAc biosynthesis in Saccharomyces cerevisiae. FEBS Lett.
PMID: 38622055
Monnin L, et al. (2024) Insights into intraspecific diversity of central carbon metabolites in Saccharomyces cerevisiae during wine fermentation. Food Microbiol 121: 104513.
PMID: 38637075
Khan A, et al. (2024) The ring rules the chain - inositol pyrophosphates and the regulation of inorganic polyphosphate. Biochem Soc Trans.
PMID: 38629621
Uemura S, et al. (2024) Mtc6/Ehg2 is a novel endoplasmic reticulum-resident glycoprotein essential for high-pressure tolerance. J Biochem.
PMID: 38621657
Huang G, et al. (2024) Multi-modular metabolic engineering and efflux engineering for enhanced lycopene production in recombinant Saccharomyces cerevisiae. J Ind Microbiol Biotechnol.
PMID: 38621758
Li Q, et al. (2024) Delayed luminescence to monitor growth stages and assess the entropy of Saccharomyces cerevisiae. Heliyon 10(7): e27866.
PMID: 38623220
Saez-Saez J, et al. (2024) Identification of transporters involved in aromatic compounds tolerance through screening of transporter deletion libraries. Microb Biotechnol 17(4): e14460.
PMID: 38635191
Fabijan A, et al. (2024) Domains in Action: Understanding Ddi1's Diverse Functions in the Ubiquitin-Proteasome System. Int J Mol Sci 25(7).
PMID: 38612889
Kertsch AL, et al. (2024) Utilization of Free and Dipeptide-Bound Formyline and Pyrraline by Saccharomyces Yeasts. Chembiochem e202300854.
PMID: 38613434
Singh J, et al. (2024) Role of Rmd9p in 3'-end processing of mitochondrial 15S rRNA in Saccharomyces cerevisiae. Mitochondrion 76: 101876.
PMID: 38599301
Movilla Miangolarra A, et al. (2024) Two-way feedback between chromatin compaction and histone modification state explains Saccharomyces cerevisiae heterochromatin bistability. Proc Natl Acad Sci U S A 121(16): e2403316121.
PMID: 38593082
Yang H, et al. (2024) Preparation of spore-immobilized glutathione reductase and its application in inhibiting Browning of pear wine. J Sci Food Agric.
PMID: 38597278
Tian Y and Okamoto K (2024) Author Correction: The nascent polypeptide-associated complex subunit Egd1 is required for efficient selective mitochondrial degradation in budding yeast. Sci Rep 14(1): 8477.
PMID: 38605138
Zhang Y, et al. (2024) Penetrating the ultra-tough yeast cell wall with finite element analysis model-aided design of microtools. iScience 27(4): 109503.
PMID: 38591007
Kulagin KA, et al. (2024) Synergistic Effect of a Combination of Proteasome and Ribonucleotide Reductase Inhibitors in a Biochemical Model of the Yeast Saccharomyces cerevisiae and a Glioblastoma Cell Line. Int J Mol Sci 25(7).
PMID: 38612788
Chappleboim M, et al. (2024) Ordered and disordered regions of the Origin Recognition Complex direct differential in vivo binding at distinct motif sequences. Nucleic Acids Res.
PMID: 38597680
Ma CR, et al. (2024) Activity reconstitution of Kre33 and Tan1 reveals a molecular ruler mechanism in eukaryotic tRNA acetylation. Nucleic Acids Res.
PMID: 38613394
Zhang J and Shirakashi R (2024) Measurement of the rotational relaxation time of intracellular water in dried yeast and Jurkat cells by near infrared spectroscopy. Biochem Biophys Res Commun 710: 149857.
PMID: 38583232
Hernandez-Abril PA, et al. (2024) Cellular Internalization and Toxicity of Chitosan Nanoparticles Loaded with Nobiletin in Eukaryotic Cell Models (Saccharomyces cerevisiae and Candida albicans). Materials (Basel) 17(7).
PMID: 38612040
Ushiyama Y, et al. (2024) Search for protein kinase(s) related to cell growth or viability maintenance in the presence of ethanol in budding and fission yeasts. Biosci Biotechnol Biochem.
PMID: 38592956
Hong S, et al. (2024) ARV1 deficiency induces lipid bilayer stress and enhances rDNA stability by activating the unfolded protein response in Saccharomyces cerevisiae. J Biol Chem 107273.
PMID: 38588806
Demeke MM, et al. (2024) Enhancing xylose fermentation capacity of engineered Saccharomyces cerevisiae by multi-step evolutionary engineering in inhibitor-rich lignocellulose hydrolysate. FEMS Yeast Res.
PMID: 38604750
Duperray M, et al. (2024) Genomic and metabolic instability during long-term fermentation of an industrial Saccharomyces cerevisiae strain engineered for C5 sugar utilization. Front Bioeng Biotechnol 12: 1357671.
PMID: 38595997
Chauhan S and Tomar RS (2024) Unveiling the molecular networks underlying cellular impairment in Saccharomyces cerevisiae: investigating the effects of magnesium oxide nanoparticles on cell wall integrity and endoplasmic reticulum stress response. Environ Sci Pollut Res Int.
PMID: 38602634
Watanabe H, et al. (2024) Ykt6 functionally overlaps with vacuolar and exocytic R-SNAREs in the yeast Saccharomyces cerevisiae. J Biol Chem 107274.
PMID: 38588809
Caron-Godon CA, et al. (2024) More than Just Bread and Wine: Using Yeast to Understand Inherited Cytochrome Oxidase Deficiencies in Humans. Int J Mol Sci 25(7).
PMID: 38612624
Li Q, et al. (2024) Lysophospholipid acyltransferase-mediated formation of saturated glycerophospholipids maintained cell membrane integrity for hypoxic adaptation. FEBS J.
PMID: 38602252